Türk, Ömer
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Turk O.
Türk, Ö.
Türk O.
Türk Ö.
Türk, Ö.
Türk O.
Türk Ö.
Job Title
Doç. Dr.
Email Address
omerturk@artuklu.edu.tr
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Department of Computer Engineering / Bilgisayar Mühendisliği Bölümü
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Sustainable Development Goals
1NO POVERTY
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2ZERO HUNGER
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3GOOD HEALTH AND WELL-BEING
2
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4QUALITY EDUCATION
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5GENDER EQUALITY
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6CLEAN WATER AND SANITATION
0
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7AFFORDABLE AND CLEAN ENERGY
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8DECENT WORK AND ECONOMIC GROWTH
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9INDUSTRY, INNOVATION AND INFRASTRUCTURE
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10REDUCED INEQUALITIES
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11SUSTAINABLE CITIES AND COMMUNITIES
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12RESPONSIBLE CONSUMPTION AND PRODUCTION
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13CLIMATE ACTION
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14LIFE BELOW WATER
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15LIFE ON LAND
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16PEACE, JUSTICE AND STRONG INSTITUTIONS
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17PARTNERSHIPS FOR THE GOALS
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Documents
21
Citations
349
h-index
9
Documents
22
Citations
257
Scholarly Output
31
Articles
24
Views / Downloads
55/96
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0
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WoS Citation Count
257
Scopus Citation Count
349
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0
Projects
1
WoS Citations per Publication
8.29
Scopus Citations per Publication
11.26
Open Access Source
13
Supervised Theses
0
| Journal | Count |
|---|---|
| Clinical EEG and Neuroscience | 2 |
| Dicle Üniversitesi Mühendislik Fakültesi Mühendislik Dergisi | 2 |
| Clinical Eeg and Neuroscience | 2 |
| 2017 INTERNATIONAL ARTIFICIAL INTELLIGENCE AND DATA PROCESSING SYMPOSIUM (IDAP) | 1 |
| 2018 INNOVATIONS IN INTELLIGENT SYSTEMS AND APPLICATIONS CONFERENCE (ASYU) | 1 |
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Now showing 1 - 10 of 31
Article Citation - WoS: 142Citation - Scopus: 186Epilepsy Detection by Using Scalogram Based Convolutional Neural Network from EEG Signals(MDPI, 2019) Türk, Ömer; Özerdem, Mehmet SiraçThe studies implemented with Electroencephalogram (EEG) signals are progressing very rapidly and brain computer interfaces (BCI) and disease determinations are carried out at certain success rates thanks to new methods developed in this field. The effective use of these signals, especially in disease detection, is very important in terms of both time and cost. Currently, in general, EEG studies are used in addition to conventional methods as well as deep learning networks that have recently achieved great success. The most important reason for this is that in conventional methods, increasing classification accuracy is based on too many human efforts as EEG is being processed, obtaining the features is the most important step. This stage is based on both the time-consuming and the investigation of many feature methods. Therefore, there is a need for methods that do not require human effort in this area and can learn the features themselves. Based on that, two-dimensional (2D) frequency-time scalograms were obtained in this study by applying Continuous Wavelet Transform to EEG records containing five different classes. Convolutional Neural Network structure was used to learn the properties of these scalogram images and the classification performance of the structure was compared with the studies in the literature. In order to compare the performance of the proposed method, the data set of the University of Bonn was used. The data set consists of five EEG records containing healthy and epilepsy disease which are labeled as A, B, C, D, and E. In the study, A-E and B-E data sets were classified as 99.50%, A-D and B-D data sets were classified as 100% in binary classifications, A-D-E data sets were 99.00% in triple classification, A-C-D-E data sets were 90.50%, B-C-D-E data sets were 91.50% in quaternary classification, and A-B-C-D-E data sets were in the fifth class classification with an accuracy of 93.60%.Article Citation - WoS: 2Citation - Scopus: 4The convolutional neural network approach from electroencephalogram signals in emotional detection(Concurrency Computation, 2021) Türk, Ömer; Özerdem, Mehmet SiraçAlthough brain-computer interfaces (BCI) progress rapidly, the desired success has not been achieved yet. One of these BCI is to detect emotional states in humans. An emotional state is a brain activity consisting of hormonal and mental reasons in the face of events. Emotions can be detected by electroencephalogram (EEG) signals due to these activities. Being able to detect the emotional state from EEG signals is important in terms of both time and cost. In this study, a method is proposed for the detection of the emotional state by using EEG signals. In the proposed method, we aim to classify EEG signals without any transform (Fourier transform, wavelet transform, etc.) or feature extraction method as a pre-processing. For this purpose, convolutional neural networks (CNNs) are used as classifiers, together with SEED EEG dataset containing three different emotional (positive, negative, and neutral) states. The records used in the study were taken from 15 participants in three sessions. In the proposed method, raw channel-time EEG recordings are converted into 28 × 28 size pattern segments without pre-processing. The obtained patterns are then classified in the CNN. As a result of the classification, three emotion performance averages of all participants are found to be 88.84%. Based on the participants, the highest classification performance is 93.91%, while the lowest classification performance is 77.70%. Also, the average f-score is found to be 0.88 for positive emotion, 0.87 for negative emotion, and 0.89 for neutral emotion. Likewise, the average kappa value is 0.82 for positive emotion, 0.81 for negative emotion, and 0.83 for neutral emotion. The results of the method proposed in the study are compared with the results of similar studies in the literature. We conclude that the proposed method has an acceptable level of performance.Article Citation - WoS: 8Citation - Scopus: 21Automatic Detection of Brain Tumors With the Aid of Ensemble Deep Learning Architectures and Class Activation Map Indicators by Employing Magnetic Resonance Images(Elsevier, 2024) Turk, Omer; Ozhan, Davut; Acar, Emrullah; Akinci, Tahir Cetin; Yilmaz, MusaToday, as in every life-threatening disease, early diagnosis of brain tumors plays a life-saving role. The brain tumor is formed by the transformation of brain cells from their normal structures into abnormal cell structures. These formed abnormal cells begin to form in masses in the brain regions. Nowadays, many different techniques are employed to detect these tumor masses, and the most common of these techniques is Magnetic Resonance Imaging (MRI). In this study, it is aimed to automatically detect brain tumors with the help of ensemble deep learning architectures (ResNet50, VGG19, InceptionV3 and MobileNet) and Class Activation Maps (CAMs) indicators by employing MRI images. The proposed system was implemented in three stages. In the first stage, it was determined whether there was a tumor in the MR images Tumor) were detected from MR images (Multi-class Approach). In the last stage, CAMs of each tumor group were created as an alternative tool to facilitate the work of specialists in tumor detection. The results showed that the overall accuracy of the binary approach was calculated as 100% on the ResNet50, InceptionV3 and MobileNet architectures, and 99.71% on the VGG19 architecture. Moreover, the accuracy values of 96.45% with ResNet50, 93.40% with VGG19, 85.03% with InceptionV3 and 89.34% with MobileNet architectures were obtained in the multi-class approach.Conference Object Classification of EEG Records for the Cursor Movement with the Convolutional Neural Network [Imleç Hareketine ilişkin EEG Kayitlarinin Evrişimsel Sinir Agi ile Siniflandirilmasi](Institute of Electrical and Electronics Engineers Inc., 2018) Türk O.; Özerdem M.S.Nowadays, very successful results are obtained with deep learning architectures which can be applied to many fields. Because of the high performances it provides in many areas, deep learning has come to a central position in machine learning and pattern recognition. In this study, electroencephalogram (EEG) signals related to up and down cursor movements were represented as image pattern by using obtained approximation coefficients after wavelet transform. The Obtained image patterns were classified by applying Convolutional Neural Network. In this study, EEG records related to cursor movements were classified and classification accuracy was obtained as 88.13%. © 2018 IEEE.Article Citation - WoS: 10Citation - Scopus: 9Identification of cotton and corn plant areas by employing deep transformer encoder approach and different time series satellite images: A case study in Diyarbakir, Turkey(ScienceDirect, 2023) Türk, Ömer; Şimşek Bağcı, Reyhan; Acar, Emrullah; Bagci, Reyhan SimsekIt is very important to determine the crops in the agricultural field in a short time and accurately. Thanks to the satellite images obtained from remote sensing sensors, information can be obtained on many subjects such as the detection and development of agricultural products and annual product forecasting. In this study, it is aimed to automatically detect agricultural crops (corn and cotton) by using Sentinel-1 and Landsat-8 satellite image indexes via a new deep learning approach (Deep Transformer Encoder). This work was carried out in several stages, respectively. In the first stage, a pilot area was determined to obtain Sentinel-1 and Landsat-8 satellite images of agricultural crops used in this study. In the second stage, the coordinates of 100 sample points from this pilot area were taken with the help of GPS and these coordinates were then transferred to Sentinel-1 and Landsat-8 satellite images. In the next step, reflection and backscattering values were obtained from the pixels of the satellite images corresponding to the sample points of these agricultural crops. While creating the data sets of satellite images, the months of June, July, August and September for the years 2016–2021, when the development and harvesting times of agricultural products are close to each other, were preferred. The image data set used in the study consists of a total of 434 images for Sentinel-1 satellite and a total of 693 images for Landsat-8. At the last stage, the datasets obtained from different satellite images were evaluated in three different categories for crop identification with the aid of Deep Transformer Encoder approach. These are: (1-) Crop identification with only Sentinel-1 dataset, (2-) Crop identification only with Landsat-8 dataset, (3-) Crop identification with both Sentinel-1 and Landsat-8 datasets. The results showed that 85%, 95% and 87.5% accuracy values were obtained from the band parameters of Sentinel-1 dataset, Landsat-8 dataset and Sentinel-1&Landsat-8 datasets, respectivelyArticle Citation - WoS: 7Citation - Scopus: 13Palmprint recognition system based on deep region of interest features with the aid of hybrid approach(SpringerLink, 2023) Türk, Ömer; Çalışkan, Abidin; Acar, Emrullah; Ergen, BurhanPalmprint recognition system is a biometric technology, which is promising to have a high precision. This system has started to attract the attention of researchers, especially with the emergence of deep learning techniques in recent years. In this study, a deep learning and machine learning-based hybrid approach has been recommended to recognize palmprint images automatically via region of interest (ROI) features. The proposed work consists of several stages, respectively. In the first stage, the raw images have been collected from the PolyU database and preprocessing operations have been implemented in order to determine ROI areas. In the second stage, deep ROI features have been extracted from the preprocessed images with the aid of deep learning technique. In the last stage, the obtained deep features have been classified by employing a hybrid deep convolutional neural network and support vector machine models. Finally, it has been observed that the overall accuracy of the proposed system has achieved very successful results as 99.72% via hybrid approach. Moreover, very low execution time has been observed for whole process of the proposed system with 0.10 s.Article Citation - Scopus: 2Classification of Epilepsy Types from Electroencephalogram Time Series Using Continuous Wavelet Transform Scalogram-Based Convolutional Neural Network(ASTM International, 2020) Türk, Ömer; Akpolat, Veysi; Varol, Sefer; Aluçlu, Mehmet Ufuk; Özerdem, Mehmet SiraçDuring the supervisory activities of the brain, the electrical activities of nerve cell clusters produce oscillations. These complex biopotential oscillations are called electroencephalogram (EEG) signals. Certain diseases, such as epilepsy, can be detected by measuring these signals. Epilepsy is a disease that manifests itself as seizures. These seizures manifest themselves in different characteristics. These different characteristics divide epilepsy seizure types into two main groups: generalized and partial epilepsy. This study aimed to classify different types of epilepsy from EEG signals. For this purpose, a scalogram-based, deep learning approach has been developed. The utilized classification process had the following main steps: the scalogram images were obtained by using the continuous wavelet transform (CWT) method. So, a one-dimension EEG time series was converted to a two-dimensional time-frequency data set in order to extract more features. Then, the increased dimension data set (CWT scalogram images) was applied to the convolutional neural network (CNN) as input patterns for classifying the images. The EEG signals were taken from Dicle University, Neurology Clinic of Medical School. This data consisted of four classes: healthy brain waves, generalized preseizure, generalized seizure, and partial epilepsy brain waves. With the proposed method, the average accuracy performance of three of the EEG records' classes (healthy, generalized preseizure, and generalized seizure), and that of all four classes of EEG records were 90.16 % (± 0.20) and 84.66 % (± 0.48). According to these results, regarding the specific accuracy ratings of the recordings, the healthy EEG records scored 91.29 %, generalized epileptic seizure records were at 96.50 %, partial seizure EEG records scored 89.63 %, and the preseizure EEG records had a 90.44 % rating. The results of the proposed method were compared to the results of both similar studies and conventional methods. As a result, the performance of the proposed method was found to be acceptable.Conference Object Citation - Scopus: 2Mental activity detection from EEG records using local binary pattern method [Yerel ikili örüntü yöntemi kullanarak EEG kayitlarindan mental aktivite tespiti](Institute of Electrical and Electronics Engineers Inc., 2017) Türk Ö.; Özerdem M.S.Electroencephalogram signals are widely used in the detection of different activities but not in the desired level. In this study with this motivation, it is aimed to obtain the attributes by using the Local Bilinear Pattern (LBP) method of EEG records for various mental activities and to classify these features by k-Nearest Neighbor (k-NN) method. The binary classification performance of these EEG records containing 5 mental tasks was evaluated. In addition, in order to evaluate classification performance, confusion matrix was used as model performance criterion. In the study, the average of the classification performance of all participants was found as 87.38%. As a model performance criterion from the participants' classification of mental activity, accuracy was 85.03%, precision was 85.40% and sensitivity was 85.47%. So, as a result the obtained results support the literature and the applicability of the LBP method for EEG markings has been confirmed. © 2017 IEEE.Article Is the Ensemble Machine Learning Model a Reliable Method for Detecting Neoplastic Infiltration of Thyroid Cartilage in Laryngeal Cancers(MDPI, 2025) Can, Sermin; Turk, Omer; Ayral, Muhammed; Kozan, Gunay; Onur, Mehmet; Yagiz, Eyyup; Akdag, MehmetBackground and Objectives: We aimed to apply the ensemble machine learning model to diagnose thyroid cartilage invasion detected in computer tomography (CT) images in laryngeal cancers and evaluate the diagnostic performance of the model. Materials and Methods: A total of 313 patients were divided into two groups: the cartilage invasion group and the no cartilage invasion group. At least four CT slices were randomly selected for each patient, resulting in a total of 1251 images used in the study. A total of 619 axial CT images from the no cartilage invasion group and 632 axial CT images from the cartilage invasion group were used in the study. We reviewed the CT images and histopathological diagnoses in all cases to determine the invasion positive- or negative-status as a ground truth. The ensemble model, comprising ResNet50 and MobileNet deep learning architectures, was applied to CT images. Results: The following were obtained by the ensemble model with the test dataset: area under the curve (AUC) 0.99, and accuracy 96.54%. This model demonstrates a very high level of performance in detecting thyroid cartilage invasion. Conclusions: The ensemble machine learning model is an effective method for detecting neoplastic infiltration of the thyroid cartilage. Moreover, it may be a valuable diagnostic tool for clinicians in assessing disease prognosis and determining appropriate treatment strategies in laryngeal cancers. In conclusion, this model could be integrated into future clinical practice in laryngology and head and neck surgery for the detection of cartilage neoplastic infiltration.Article Citation - WoS: 5Citation - Scopus: 5Deep Learning-Based Artificial Intelligence Can Differentiate Treatment-Resistant and Responsive Depression Cases With High Accuracy(Sage Publications inc, 2025) Metin, Sinem Zeynep; Uyulan, Caglar; Farhad, Shams; Erguzel, Tuerker Tekin; Turk, Omer; Metin, Baris; Tarhan, NevzatBackground: Although there are many treatment options available for depression, a large portion of patients with depression are diagnosed with treatment-resistant depression (TRD), which is characterized by an inadequate response to antidepressant treatment. Identifying the TRD population is crucial in terms of saving time and resources in depression treatment. Recently several studies employed various methods on EEG datasets for automatic depression detection or treatment outcome prediction. However, no previous study has used the deep learning (DL) approach and EEG signals for detecting treatment resistance. Method: 77 patients with TRD, 43 patients with non-TRD, and 40 healthy controls were compared using GoogleNet convolutional neural network and DL on EEG data. Additionally, Class Activation Maps (CAMs) acquired from the TRD and non-TRD groups were used to obtain distinctive regions for classification. Results: GoogleNet classified the healthy controls and non-TRD group with 88.43%, the healthy controls and TRD subjects with 89.73%, and the TRD and non-TRD group with 90.05% accuracy. The external validation accuracy for the TRD-non-TRD classification was 73.33%. Finally, the CAM analysis revealed that the TRD group contained dominant features in class detection of deep learning architecture in almost all electrodes. Limitations: Our study is limited by the moderate sample size of clinical groups and the retrospective nature of the study. Conclusion: These findings suggest that EEG-based deep learning can be used to classify treatment resistance in depression and may in the future prove to be a useful tool in psychiatry practice to identify patients who need more vigorous intervention.
