Tıbbi Hizmetler ve Teknikler Bölümü Koleksiyonu

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Citation - WoS: 4
Citation - Scopus: 4
Application of Half-Sandwich Metal-Phosphinite Compounds to Biological Activities: Determine the energies of the HOMO and LUMO levels
(Wiley Online Library, 2022) Meriç, Nermin; Rafikova, Khadichakhan; Zazybin, Alexey; Güzel, Remziye; Kayan, Cezmi; Karakaş, Duygu Elma; Dündar, Abdurrahman; ISLAM, Sholpan; Okumuş, Veysi; Aydemir, Murat
Mononuclear transition metal complexes 1-(furan-2-yl)ethyldiphenyl[dichloro(η6-p-cymene)ruthenium(II)]phosphinite, (2), 1-(furan-2-yl)ethyldiphenyl[dichloro(η6-benzene) ruthenium(II)] phosphinite (3), 1-(furan-2-yl)ethyldipheny[chloro(η4-1,5-cyclooctadiene)rhodium(I)]phosphinite (4), 1-(furan-2-yl)ethyldiphenyl[dichloro (η5pentamethylcyclopentadienyl)iridium (III)] phosphinite (5) were synthesized and characterized by microanalysis, infrared, MS, and NMR spectroscopy. The biological activities of the complexes were also tested. Compounds 2 and 5 were the best complexes at DPPH radical scavenging and reducing power activity at 73.27 % and 0.41 at 200 μg/mL, respectively. The highest antimicrobial activity exhibited by complex 3 as 14 mm inhibition zone against S. aureus. All of the complexes have cleaved the DNA from the double-strand and exhibited three bands on gel electrophoresis. Moreover, cyclic voltammetry studies of the phosphinite complexes were carried out to determine the energies of the HOMO and LUMO levels as well as to estimate their electrochemical and some electronic properties.
Citation - WoS: 12
Citation - Scopus: 12
Role of 2.4 Ghz Radiofrequency Radiation Emitted From Wi-Fi on Some Mirna and Faty Acids Composition in Brain
(Taylor & Francis inc, 2022) Dasdag, Suleyman; Akdag, Mehmet Zulkuf; Bashan, Mehmet; Kizmaz, Veysi; Erdal, Nurten; Erdal, Mehmet Emin; Yegin, Korkut
The purpose of this study is to investigate the effects of 2.4 GHz Wi-Fi exposure, which is continuously used in the internet connection by mobile phones, computers and other wireless equipment, on microRNA and membrane and depot fatty acid composition of brain cells. Sixteen Wistar Albino rats were divided equally into two groups such as sham and exposure. The rats in the experimental group (n = 8) were exposed to 2.4 GHz RFR emitted from a Wi-Fi generator for 24 h/day for one year. The animals in the control group (n = 8) were kept under the same conditions as the experimental group, but the Wi-Fi generator was turned off. At the end of the study, rats were sacrificed and brains were removed to analyze miRNA expression and membrane and depot fatty acids of brain cells. We analyzed the situation of ten different miRNA expressions and nineteen fatty acid patterns in this study. We observed that long-term and excessive exposure of 2.4 GHz Wi-Fi radiation increased rno-miR-181a-5p, phosphatidylserine (PS) and triacylglycerol (TAG) in the brain. In conclusion, 2.4 GHz Wi-Fi exposure has the potential to alter rno-miR-181a-5p expression and the fatty acid percentage of some membrane lipids such as phospholipid (PL), phosphatidylserine (PS) and triacylglycerol (TAG), which are depot fats in the brain. However, the uncontrolled use of RFRs, whose use and diversity have reached incredible levels with each passing day and which are increasing in the future, may be paving the way for many diseases that we cannot connect with today.
Citation - WoS: 9
Citation - Scopus: 9
Synthesis and Characterization of Bionanomaterials and Evaluation of Their Antioxidant, Antibacterial, and DNA Cleavage Activities
(Chemistry Select, 2021) Tarhan, Tuba; Dündar, Abdurrahman; Okumuş, Veysi; Çulha, Mustafa
In this study, the hexagonal boron nitride (hBN) (1), poly-levodopa (P-L(DP) (2), P-L(DP) coated hBN (hBN@P(L-DP)) (3), and silver nanoparticles (AgNPs) decorated hBN@P(L-DP) (hBN@P(L-DP)-AgNPs) (4) were synthesized and characterized by multiple spectroscopic techniques. Additionally, their biological properties such as antioxidant, antibacterial, and DNA cleavage activities were determined. It is worth noting that, products 3 and 4 were newly synthesized structures. The antioxidant activities of all the nanomaterials 1, 2, 3, and 4 nanomaterials were investigated using some tests such as DPPH (2,2-diphenyl-1-picrylhydrazyl) radical scavenging and reducing power ability. Among the synthesized nanomaterials, product 2 exhibited the highest radical scavenging (64.8±1.94 %) and reducing power activity (0.61±0.017) at a concentration of 200 mg L−1. Product 4 was determined to have antibacterial activity against all three Gram-positive and three Gram-negative test bacteria. In addition, all the nanomaterials were tested for cleavage activity using pBR 322 plasmid DNA, as a result of which it was determined that only product 4 showed the ability of cleavage from both chains of DNA.
Citation - WoS: 8
Citation - Scopus: 9
Synthesis and antioxidant, aggregation, and electronic properties of 6-tert-butyl-1,4-benzodioxine substituted phthalocyanines
(Turkish Journal of Chemistry, 2018) Ağırtaş, Mehmet Salih; Cabir, Beyza; Gümüş, Selçuk; Özdemir, Sadin; Dündar, Abdurrahman
As a starting material, 7-tert-butyldibenzo [b,e] [1,4] dioxine-2,3-dicarbonitrile was prepared by the reac- tion of 4-tert-butylcatechol with 4,5-dichlorophthalonitrile. Metallophthalocyanine complexes ( 4 { 7 ) were obtained by cyclotetramerization of 7-tert-butyldibenzo [b,e] [1,4] dioxine-2,3-dicarbonitrile. All compounds were characterized by elemental analysis and other spectroscopic methods (IR, UV/Vis, and 1 H NMR). Phthalocyanine compounds remained nonaggregated in tetrahydrofuran at the studied concentration ranges. Metallophthalocyanines ( 4 { 7 ) were tested for their antioxidant activities. The antioxidant activity processes included evaluation of radical-scavenging activity, chelat- ing activity, and reducing power. These compounds were compared to standard antioxidant ascorbic acid. The electronic data of the new compounds were obtained by computational calculations at the B3LYP/6-31G (d,p) level of theory.
Citation - WoS: 29
Citation - Scopus: 31
Structural analysis and biological functionalities of iron(III)- and manganese(III)-thiosemicarbazone complexes: in vitro anti-proliferative activity on human cancer cells, DNA binding and cleavage studies
(SPRINGER, 2019) Kaya, Busra; Yilmaz, Zehra Kubra; Sahin, Onur; Aslim, Belma; Tukenmez, Ummugulsum; Ulkusever, Bahri
One iron(III) and two manganese(III) complexes based on thiosemicarbazone were synthesized and characterized using analytical and spectroscopic data. The crystallographic analysis showed the square pyramid structures of the complexes. Electronic spectra analysis was performed to determine the nature of the interaction between the complexes and calf thymus DNA (CT-DNA). DNA cleavage activities of the complexes were examined by gel electrophoresis (pBR322 DNA). The cytotoxicity of the complexes was determined against human cervical carcinoma (HeLa) and human colorectal adenocarcinoma (HT-29) cell lines by MTT assay. The results indicated that complex Fe1 is bound to CT-DNA via the intercalation mode, while complexes Mn1 and Mn2 are bound to CT-DNA via groove binding and/or electrostatic interactions rather than the intercalation mode. In addition, they showed good binding activity, which followed the order of Fe1>Mn2>Mn1. Complexes were found to promote the cleavage of DNA from supercoiled form (SC, Form I) to nicked circular form (NC, Form II) without concurrent formation of Form III, revealing the single-strand DNA cleavage. No significant cleavage was found in the presence of Mn1 and Mn2; however, it was observed at 2000 and 3000 mu M concentrations of Fe1. The ability of Fe1 to cleave DNA was greater than that of other complexes and these results are in conformity with their DNA-binding affinities. Cytotoxicity determination tests revealed that the complex Fe1 on HeLa and HT-29 cells exhibited a higher anti-proliferative effect than Mn1 and Mn2 (Fe1>Mn2>Mn1). These studies suggested that the complex Fe1 could be a good candidate as a chemotherapeutic drug targeting DNA. [GRAPHICS]
Citation - Scopus: 17
Basic Red 18 and Remazol Brilliant Blue R biosorption using Russula brevipes, Agaricus augustus, Fomes fomentarius
(Water Practice and Technology, 2022) Arslantaş, Ceren; M’barek, Islem; Saleh, Mohammed; Isik, Zelal; Ozdemire, Sadin; Dündar, Abdurrahman; Dizge, Nadir
In this study, the adsorption abilities of Russula brevipes (RB), Agaricus augustus (AA), and Fomes fomentarius (FF) were evaluated in Basic Red 18 (BR18) and Remazol Brilliant Blue R (RBBR) biosorption from textile effluent. The adsorbents were characterized via Scanning Electron Microscopy (SEM), Energy Dispersive Spectrometer (SEM-EDS), and Fourier transform infrared spectroscopy (FT/IR). Fomes fomentarius presented a low sorption capacity contrary to the two other fungi (RB and AA). RB and AA were selected as potential adsorbents for BR18 and RBBR, respectively. The maximum BR18 removal efficiencies for 10, 25, and 50 mg/L were obtained after 60 min to be 90, 88, and 86%, respectively. The RBBR adsorption efficiencies were 96.4, 96, and 90% for dye concentrations of 10, 25, and 50 mg/L. The adsorption of BR18 onto the RB biomass followed the Freundlich isotherm, while Langmuir is the best isotherm for RBBR sorption’s elucidation onto AA fungus biomass. The removal of BR18 by BR biomass was found to follow the pseudo-second order. In contrast, the adsorption of RBBR onto the AA biomass followed Lagergren’s pseudo-first order. For both adsorbents, the adsorption was exothermic, feasible, and spontaneous in nature. Finally, the dyes’ biosorption process was perfectly achieved onto fungi biomass via physisorption
Citation - Scopus: 21
Antioxidant, anticancer and anticholinesterase activities of flower, fruit and seed extracts of hypericum amblysepalum HOCHST
(Asian Pacific Organization for Cancer Prevention, 2015) Keskin, Cumali
Background: Cancer is an unnatural type of tissue growth in which the cells exhibit unrestrained division, leading to a progressive increase in the number of dividing cells. It is now the second largest cause of death in the world. The present study concerned antioxidant, anticancer and anticholinesterase activities and protocatechuic, catechin, caffeic acid, syringic acid, p-coumaric acid and o-coumaric concentrations in methanol extracts of flowers, fruits and seeds of Hypericum amblysepalum. Materials and Methods: Antioxidant properties including free radical scavenging activity and reducing power, and amounts of total phenolic compounds were evaluated using different tests. Protocatechuic, catechin, caffeic acid, syringic acid, p-coumaric acid and o-coumaric concentrations in extracts were determined by HPLC. Cytotoxic effects were determined using the MTT test with human cervix cancer (HeLa) and rat kidney epithelium cell (NRK-52E) lines. Acetyl and butyrylcholinesterase inhibitory activities were measured by by Ellman method. Results: Total phenolic content of H. amblysepalum seeds was found to be higher than in fruit and flower extracts. DPPH free radical scavenging activity of the obtained extracts gave satisfactory results versus butylated hydroxyanisole and butylated hydroxytoluene as controls. Reducing power activity was linearly proportional to the studied concentration range: 10-500 µg/mL LC50 values for H. amblysepalum seeds were 11.7 and 2.86 respectively for HeLa and NRK-52E cell lines. Butyryl-cholinesterase inhibitory activity was 76.9 ± 0.41 for seed extract and higher than with other extracts. Conclusions: The present results suggested that H. amblysepalum could be a potential candidate anti-cancer drug for the treatment of human cervical cancer, and good source of natural antioxidants.
Citation - WoS: 7
Citation - Scopus: 7
Investigation of serum vaspin, visfatin, chemerin and IL-18 levels in migraine patients
(Arq Neuropsiquiatr, 2021) Dönder, Ahmet; Cafer, Vugar; Yilmaz, Ahmet; Aslanhan, Hamza; Arikanoğlu, Adalet
Background: Migraines are headaches caused by changes in the trigeminovascular metabolic pathway. Migraine headache attacks are associated with neurovascular inflammation, but their pathophysiological mechanisms have not been fully explained. Objective: To investigate the relationship between serum vaspin, visfatin, chemerin and interleukin-18 (IL-18) levels and the frequency of attacks in migraine headache. Methods: Three groups were established: migraine with aura (n = 50), migraine without aura (n = 50) and control group (n = 50). The migraine diagnosis was made in accordance with the International Classification of Headache Disorders-III beta diagnostic criteria. The analyses on serum vaspin, visfatin, chemerin and IL-18 levels were performed using the enzyme-linked immunosorbent assay method. Results: The serum vaspin, visfatin, chemerin and IL-18 levels were found to be significantly higher in the migraine patients than in the control group (p < 0.01). No statistically signiﬁcant differences in serum vaspin, visfatin, chemerin and IL-18 levels were found among the migraine patients during attacks or in the interictal period (p>0.05). The serum visfatin and chemerin levels of the migraine patients were positively correlated with their serum IL-18 levels (p < 0.01), while their serum chemerin and visfatin levels were positively correlated with their serum vaspin levels (p < 0.05). Conclusions: This study showed that these biomarkers may be related to migraine pathogenesis. Nonetheless, we believe that more comprehensive studies are needed in order to further understand the role of vaspin, visfatin, chemerin and IL-18 levels in the pathophysiology of migraine headaches
Citation - Scopus: 7
Reactive Blue 19 Adsorption on Activated Carbon from Pumpkin (Cucurbita Pepo) Seed Waste: Kinetic, Isotherm and Thermodynamic Studies
(Kauno Technologijos Universitetas, 2024) Kızıl, Yusuf; Benek, Veysel; Teğin, İbrahim; Önal, Yunus; Erol, Kadir; Alacabey, İhsan
In this study, the removal of reactive blue 19 dyestuffs in aqueous systems was investigated by the adsorption method using activated carbon obtained from pumpkin seed waste. Activated carbon obtained from pumpkin seed waste functionalized with ZnCl2 was used as an absorbent. Pumpkin seed hydrochar was characterized by FT-IR, SEM, TGA-DTA, BET, and XPS. In the experimental stages, the adsorption equilibrium time was determined as 45 minutes, the adsorbent dosage was 0.8 g and the optimum pH was 6.0. After this step, the adsorption parameters of Langmuir, Freundlich, Temkin, and Dubinin-Radushkevich isotherms were investigated. It has been pointed out that the adsorption process fits better with the Freundlich isotherm model, and the adhesion occurs in a multilayered manner and on a heterogeneous surface. Freundlich and Dubinin-Radushkevich isotherms support that the bonding mechanism is realized by physical interactions. When the kinetic data were evaluated, adsorption mechanism was found to be compatible with the pseudo-second-order kinetic model. The thermodynamic parameters of adsorption indicate that the system is endothermic, and the adsorption of reactive blue 19 on activated carbon is a spontaneous process.
Citation - Scopus: 3
Fe3O4@SA MNCs Synthesis, Characterization, and First-time Use in Hydrogen Production by NaBH4 Hydrolysis
(Turkish Chemical Society, 2024) Umaz, Adil
Hydrogen is a clean energy carrier that will reduce dependence on fossil fuels and contribute to reducing the harmful effects on the environment resulting from using fossil fuels. Hydrogen is produced by the hydrolysis of sodium borohydride (NaBH4), one of the chemical hydrides, using a catalyst. In this study, Fe3O4@Salicylic acid magnetic nano-catalyst (Fe3O4@SA MNCs) was synthesized using the co-precipitation technique. The structural, physical, and chemical properties of the produced Fe3O4@SA MNCs were characterized by FT-IR, XRD, VSM, SEM, and SEM-EDX methods. At room temperature, the effect on hydrogen production performance was examined in the amounts of Fe3O4@SA MNCs (10, 25, 50, 75, and 100 mg), NaOH (0, 10, 20, and 25 mg), and NaBH4 (25, 50, 100, 150 and 200 mg). The highest hydrogen generation rates (HGR) were obtained using 10 mg Fe3O4@SA MNCs, 150 mg NaBH4, and 0 mg NaOH at room temperature. The obtained HGR value was calculated as 400 mL gcat-1.min-1. Fe3O4@SA MNCs were used for hydrogen production for the first time in this study. This study showed that Fe3O4@SA MNCs exhibit catalytic properties and are a promising, efficient catalyst in hydrogen production from NaBH4.
Citation - WoS: 9
Citation - Scopus: 11
Determination of the Fatty Acid Composition of the Fruits and Different Organs of Lentisk (Pistacia lentiscus L.)
(TAYLOR & FRANCIS LTD, 2015) Akdemir, Ömer Faruk; Tilkat, Engin; Onay, A.; Keskin, Cumali; Başhan, Mehmet; Kilinc, F. M.; Kizmaz, V.; Suzerer, V.
This paper reports the fatty acid composition of the oil extracts from seeds and in vivo and in vitro grown organs of Pistacia lentiscus L. were determined by using gas chromatography. The main fatty acids were linoleic (LA), palmitic (PALM), oleic (OLA) and linolenic (ALA) acids in the fruits, resins and in both in vivo and in vitro grown root, leaf and stem sections of male or female tree. The major fatty acids were represented by polyunsaturated fatty acids (PUFA) accounting for 56.94 %, 64.44 % and 55.57 % in root, leaf and stem part of male tree grown in vivo, respectively. The prominent class of fatty acid composition of different male organs of P. lentiscus L. regenerated in vitro was represented by PUFA accounting for 63.24 %. The monounsaturated fatty acid (MUFA), OLA and PUFA, LA were determined in the oils of the two genotypes studied.
Citation - WoS: 22
Citation - Scopus: 25
Biosorption of chlorophenoxy acid herbicides from aqueous solution by using low-cost agricultural wastes
(TAYLOR & FRANCIS INC, 2015) Okumus, Veysi; Celik, K. Serdar; Ozdemir, Sadin; Dundar, Abdurrahman; Kilinc, Ersin
The potential biosorption abilities of apple shell (AS), orange peel (OP), banana peel (BP), and millet waste (MW) as a bio-waste material to remove 2,4-dichlorophenoxy acetic acid (2,4-D), 2,4-dichlorophenoxy propanoic acid (2,4-DP), and 2,4-dichlorophenoxy butyric acid (2,4-DB) from aqueous solution were investigated in batch condition. Optimum biosorption conditions were determined as a function of contact time, pH of the solution, amount of biomass, and initial pesticide concentrations. The concentrations of the pesticides in the remaining solutions were simultaneously determined by high performance thin layer chromatography. Langmuir and Freundlich models were applied to describe the biosorption isotherm of the pesticides by agricultural wastes. The experimental adsorption data were fitted to Langmuir adsorption models (r(2)>0.99). It was found that adsorption of 2,4-DP was higher for all biosorbent. The highest maximum adsorption capacities of 2,4-DP were found as 40.08, 22.71, 33.26, and 45.45mg/g, respectively, for AS, OP, BP, and MW. Maximum adsorption capacity was obtained for 2,4-D as OP>MW>BP>AS, 2,4-DP as MW>AS>BP>OP, and 2,4-DB as OP>AS>BP>MW. From the results, it can be said that MW was an effective biosorbent for removal of 2,4-DP and OP was an effective biosorbent for removal of 2,4-D and 2,4-DB through the studied pesticides. Optimum biosorption conditions were determined as 60min of contact time, 100mg of biomass, AS at pH 6.0, OP at pH 6.0, MW at pH 7.0, and BP at pH 7.0. FT-IR was employed to understand the surface properties of biosorbents. According to the results, agricultural wastes have high adsorption capacity.
Citation - WoS: 17
Citation - Scopus: 24
Resistance, bioaccumulation and solid phase extraction of uranium (VI) by Bacillus vallismortis and its UV-vis spectrophotometric determination
(ELSEVIER SCI LTD, 2017) Ozdemir, Sadin; Oduncu, M. Kadir; Kilinc, Ersin; Soylak, Mustafa
Bioaccumulation, resistance and preconcentration of uranium(VI) by thermotolerant Bacillus vallismortis were investigated in details. The minimum inhibition concentration of (MIC) value of U(VI) was found as 85 mg/L and 15 mg/L in liquid and solid medium, respectively. Furthermore, the effect of various U(VI) concentrations on the growth of bacteria and bioaccumulation on B. vallismortis was examined in the liquid culture media. The growth was not significantly affected in the presence of 1.0, 2.5 and 5.0 mg/L U(VI) up to 72 h. The highest bioaccumulation value at 1 mg/L U(VI) concentration was detected at the 72nd hour (10 mg/g metal/dry bacteria), while the maximum bioaccumulation value at 5 mg/L U(VI) concentration was determined at the 48th hour (50 mg metal/dry bacteria). In addition to these, various concentration of U(VI) on alpha-amylase production was studied. The alpha-amylase activities at 0, 1, 2.5 and 5 mg/L U(VI) were found as 3313.2, 3845.2, 3687.1 and 3060.8 U/mg, respectively at 48th. Besides, uranium (VI) ions were preconcentrated with immobilized B. vallismortis onto multiwalled carbon nanotube (MWCNT) and were determined by UV-vis spectrophotometry. The surface macro structure and functionalities of B. vallismortis immobilized onto multiwalled carbon nanotube with and without U(VI) were examined by FT-IR and SEM. The optimum pH and flow rate for the biosorption of U(VI) were 4.0-5.0 and 1.0 mL/min, respectively. The quantitative elution occurred with 5.0 mL of 1 mol/L HCI. The loading capacity of immobilized B. vallismortis was determined as 23.6 mg/g. The certified reference sample was employed for the validation of developed solid phase extraction method. The new validated method was applied to the determination of U(VI) in water samples from Van Lake-Turkey. (C) 2017 Elsevier Ltd. All rights reserved.
Citation - WoS: 1
Citation - Scopus: 1
Cerebrospinal fluid levels of sortilin-1, lipocalin-2, autotaxin, decorin and interleukin-33 in patients with idiopathic intracranial hypertension
(Arquivos de Neuro-Psiquiatria, 2022) Dündar, Ahmet; Arıkanoğlu, Adalet; Özdemir, Hasan Hüseyin; Aslanhan, Hamza; Çevik, Mehmet Uğur
Background Idiopathic intracranial hypertension (IIH) is characterized by increased cerebrospinal fluid (CSF) pressure of unknown cause. It has been suggested that the inflammatory process plays a role in the pathophysiology of the disease. Sortilin-1, lipocalin-2, autotaxin, decorin, and interleukin-33 (IL-33) are among the factors involved in inflammatory processes. Objective To investigate the CSF levels of sortilin-1, lipocalin-2, autotaxin, decorin, and IL-33 in patients with IIH. Methods A total of 24 IIH patients and 21 healthy controls were included in the study. Demographic characteristics of the patients and of the control group as well as CSF pressures were evaluated. Sortilin-1, lipocalin-2, autotaxin, decorin and IL-33 levels in the CSF were measured. Results The CSF levels lipocalin-2, sortilin-1, autotaxin, IL-33 and CSF pressure were significantly higher in the patients group compared with the control group (p < 0.001). Decorin levels were reduced in patients (p < 0.05). There was no correlation between the autotaxin and IL-33 levels and age, gender, CSF pressure, and body mass index. The results of our study showed that inflammatory activation plays an important role in the development of the pathophysiology of IIH. In addition, the fact that the markers used in our study have never been studied in the etiopathogenesis of IIH is important in explaining the molecular mechanism of this disease. Conclusion Studies are needed to evaluate the role of these cytokines in the pathophysiology of the disease. It is necessary to evaluate the effects of these molecules on this process. © 2022. Academia Brasileira de Neurologia. All rights reserved.
Citation - WoS: 5
Citation - Scopus: 7
Synthesis and characterization of hexagonal boron nitride used for comparison of removal of anionic and cationic hazardous azo-dye: kinetics and equilibrium studies
(TÜBİTAK, 2020) Tarhan, Tuba
The purpose of this study was to compare the adsorption behavior of cationic and anionic dyes onto a hexagonal boron nitride (hBN) nanostructure that was rich in a negative charge. Herein, the hBN nanostructure was synthesized using boric acid as a precursor material. The characteristic peaks of the hBN nanostructure were performed using Fourier transform infrared (FT-IR) and Raman spectroscopies. The morphology and the particle size of hBN nanostructure were determined by transmission electron microscopy (TEM) and scanning electron microscopy (SEM). During the studies, various essential adsorption parameters were investigated, such as the initial dye concentration, pH of the dye solution, adsorbent dose, and contact time. Under optimal conditions, the removal of 42.6% Metanil yellow (MY) and 90% Victoria blue B (VBB) from aqueous solution was performed using a 10-mg hBN nanostructure. Furthermore, the equilibrium studies showed that the Freundlich isotherm model fitted well for the removal of MY. However, the Langmuir isotherm model fitted well for the removal of VBB. Moreover, according to the results obtained from the kinetic studies, while the first-order kinetic model was suited for the adsorption of the MY, the second-order kinetic model was found to well fit for the adsorption of VBB.
Citation - WoS: 24
Citation - Scopus: 26
Enantioseparation of Mandelic Acid Enantiomers With Magnetic Nano-Sorbent Modified by a Chiral Selector
(Wiley Online Library, 2015) Tarhan; Tural; Tural; Topal;, Tuba; Bilsen; Servet; Giray
In this study,R(+)-α-methylbenzylamine-modified magnetic chiral sorbent wassynthesized and assessed as a new enantioselective solid phase sorbent for separation ofmandelic acid enantiomers from aqueous solutions. The chemical structures and magnetic prop-erties of the new sorbent were characterized by vibrating sample magnetometry, transmissionelectron microscopy, Fourier transform infrared spectroscopy, and dynamic light scattering.The effects of different variables such as the initial concentration of racemic mandelic acid, dos-age of sorbent, and contact time upon sorption characteristics of mandelic acid enantiomers onmagnetic chiral sorbent were investigated. The sorption of mandelic acid enantiomers followeda pseudo-second-order reaction and equilibrium experiments were wellfitted to a Langmuir iso-therm model. The maximum adsorption capacity of racemic mandelic acid on to the magneticchiral sorbent was found to be 405 mg g 1. The magnetic chiral sorbent has a greater affinityfor (S)-(+)-mandelic acid compared to(R)-( )-mandelic acid. The optimum resolution wasachieved with 10 mL 30 mM of racemic mandelic acid and 110 mg of magnetic chiral sorbent.The best percent enantiomeric excess values (up to 64%) were obtained by use of a chiralpakAD-H column.
Citation - WoS: 2
Citation - Scopus: 2
Endohelminth Fauna of Teleost Fishes from Coasts of Şile Region of the Black Sea
(HELMINTHOLOGIA, 2021) Aslan Çelik, Burçak; Oğuz, Mehmet Cemal
A total of 508 fish specimens belonging to 19 species collected in the coast of Şile region of the Black sea were examined to detect the presence of endohelminths. Of this, 357 (70.27%) were found to be infected with parasites. 15 distinct helminths species were recovered including four species of nematodes, seven digenean species, one species of cestodes and three species of acanthocephalans. It was also determined that the species of nematode Hysterothylacium aduncum was the most common parasite and the most diverse endohelminth fauna was found in Gobius niger and Solea vulgaris, with five species. Furthermore, it should be noted that Capillaria gracilis is reported for the first time from the Turkish coasts. The infection rates, hosts, and parasites are listed in this paper.
Citation - WoS: 18
Citation - Scopus: 19
Serum YKL-40 levels in patients with multiple sclerosis
(Arq Neuropsiquiatr, 2021) Dönder, Ahmet; Özdemir, Hasan Hüseyin
Background: Multiple sclerosis (MS) is a chronic inflammatory disease affecting the central nervous system. The YKL-40 protein, which is secreted from various cells that contribute to inflammation and infection, plays a role in immune regulation. Objective: This study investigated the serum YKL-40 levels of patients with clinically isolated syndrome (CIS) and MS. Methods: The participants was divided into three groups: 1) patients with CIS (n = 20); 2) patients with relapsing-remitting MS (RRMS; n = 39); and 3) healthy individuals (n = 35). The YKL-40 levels in serum samples obtained from the participants were measured using enzyme-linked immunoassays. Results: The median serum YKL-40 level was 20.2 ng/mL (range 9.8-75.9 ng/mL) in the patients with CIS, 22.7 ng/mL (range 13.4-57.9 ng/mL) in the patients with RRMS and 11.0 ng/mL (range 10.0-17.3 ng/mL) in the control group (p < 0.001). The serum YKL-40 levels in the patients with RRMS were correlated with the patients’ expanded disability status scale scores and ages (p < 0.05). No relationships were determined between the serum YKL-40 levels and the other variables (p > 0.05). The serum YKL-40 levels were higher in the CIS group than in the MS group. These findings show that the serum YKL-40 levels were high even at the beginning of the disease. The serum YKL-40 levels were also not involved in the progression to clinically definite MS. Conclusions: The findings from this study suggested that YKL-40 may be a useful marker for the inflammatory process of MS.
Citation - WoS: 6
Citation - Scopus: 6
Increased visinin-like protein-1, YKL-40, lipocalin-2, and IL-23 levels in patients with migraine
(Taylor & Francis Online, 2022) Dündar, Ahmet; Cafer, Vugar; Aslanhan, Hamza; Özdemir, Hasan Hüseyin; Yilmaz, Ahmet; Çevik, Mehmet Uğur
Background: Migraine is a type of primary headache caused by changes in the trigeminal system and has been reported to be associated with neurovascular inflammation of cerebral and extracerebral vessels. Objective: It is known that inflammation is an important process in the pathogenesis of migraine. It has been shown that the molecules of visinin-like protein 1 (Vilip-1), YKL-40, lipocalin-2 and interleukin (IL)-23 play a role in the inflammatory process. Our aim is to investigate the role of this molecule in the metabolic pathway of migraine disease. Methods: Fifty migraine patients with and without aura in the interictal period were included in the study. Vilip-1, YKL-40, lipocalin-2, and IL-23 levels were measured by ELISA method. Results: Serum vilip-1, YKL-40, lipocalin-2, and IL-23 levels were found to be significantly higher in migraine patients compared to the control group. We found that this molecule increased significantly in migraine subgroups compared to the control group (p < 0.001). A positive significant correlation was found between vilip-1 level and YKL-40 and lipocalin-2 levels in migraine patients. In addition, a positive correlation was observed between visual analogue scale score, number of days with pain and vilip-1 level (p < 0.01). The results of our study showed that activation of inflammatory mediators may play a role in the pathogenesis of migraine disease. In addition, our study is valuable in that inflammatory molecules are high in the interictal period and these biomarkers have never been analyzed in migraine patients. However, we still believe that larger studies are needed to explain the role of vilip-1, YKL-40, lipocalin-2, and IL-23 in the molecular mechanism of migraine disease.
Citation - WoS: 29
Citation - Scopus: 31
Structural analysis and biological functionalities of iron(III)- and manganese(III)-thiosemicarbazone complexes: in vitro anti-proliferative activity on human cancer cells, DNA binding and cleavage studies
(Springer, 2019) Kaya, Büşra; Yılmaz, Zehra Kübra; Şahin, Onur; Aslim, Belma; Tükenmez, Ümmügülsüm; Ülküseven, Bahri
One iron(III) and two manganese(III) complexes based on thiosemicarbazone were synthesized and characterized using analytical and spectroscopic data. The crystallographic analysis showed the square pyramid structures of the complexes. Electronic spectra analysis was performed to determine the nature of the interaction between the complexes and calf thymus DNA (CT-DNA). DNA cleavage activities of the complexes were examined by gel electrophoresis (pBR322 DNA). The cytotoxicity of the complexes was determined against human cervical carcinoma (HeLa) and human colorectal adenocarcinoma (HT-29) cell lines by MTT assay. The results indicated that complex Fe1 is bound to CT-DNA via the intercalation mode, while complexes Mn1 and Mn2 are bound to CT-DNA via groove binding and/or electrostatic interactions rather than the intercalation mode. In addition, they showed good binding activity, which followed the order of Fe1 > Mn2 > Mn1. Complexes were found to promote the cleavage of DNA from supercoiled form (SC, Form I) to nicked circular form (NC, Form II) without concurrent formation of Form III, revealing the single-strand DNA cleavage. No significant cleavage was found in the presence of Mn1 and Mn2; however, it was observed at 2000 and 3000 µM concentrations of Fe1. The ability of Fe1 to cleave DNA was greater than that of other complexes and these results are in conformity with their DNA-binding affinities. Cytotoxicity determination tests revealed that the complex Fe1 on HeLa and HT-29 cells exhibited a higher anti-proliferative effect than Mn1 and Mn2 (Fe1 > Mn2 > Mn1). These studies suggested that the complex Fe1 could be a good candidate as a chemotherapeutic drug targeting DNA.

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